When you hover over the checkboxes there appears a Tooltip. The first box is generally "Linebreak before" and the 2nd box is for "Linebreak after"
@hwmonkey I see there is still an issue in the alignment logic. I will have to fix this.
I had it attack one of the most difficult to read sections of a query I had open and .... it performed BEAUTIFULLY on the JOIN section. Mark this request as 'complete.'
Thank you